Gene set enrichment analysis in R

Gene set enrichment analysis in R

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Gene set enrichment analysis in R
In this workshop, we introduce gene set analysis relevant to RNA-sequencing data. In it, we cover: - Broad Molecular Signatures Database (MSigDB) gene sets - hypergeometric enrichment with clusterProfiler - gene set enrichment analysis (GSEA) with fgsea Materials https://github.com/hawn-lab/workshops_UW_Seattle/tree/master/2021.07.14_GSEA